Showing posts with label Fossil Record. Show all posts
Showing posts with label Fossil Record. Show all posts

Mar 11, 2024

New study reveals insight into which animals are most vulnerable to extinction due to climate change

In a new study, researchers have used the fossil record to better understand what factors make animals more vulnerable to extinction from climate change. The results could help to identify species most at risk today from human-driven climate change. The findings have been published today in the journal Science.

Past climate change (often caused by natural changes in greenhouse gases due to volcanic activity) has been responsible for countless species' extinctions during the history of life on Earth. But, to date, it has not been clear what factors cause species to be more or less resilient to such change, and how the magnitude of climate change affects extinction risk.

Led by researchers at the University of Oxford, this new study sought to answer this question by analysing the fossil record for marine invertebrates (such as sea urchins, snails, and shellfish) over the past 485 million years. Marine invertebrates have a rich and well-studied fossil record, making it possible to identify when, and potentially why, species become extinct.

Using over 290,000 fossil records covering more than 9,200 genera, the researchers collated a dataset of key traits that may affect resilience to extinction, including traits not studied in depth previously, such as preferred temperature. This trait information was integrated with climate simulation data to develop a model to understand which factors were most important in determining the risk of extinction during climate change.

Key findings:

  • The authors found that species exposed to greater climate change were more likely to become extinct. In particular, species that experienced temperature changes of 7°C or more across geological stages were significantly more vulnerable to extinction.
  • The authors also found that species occupying climatic extremes (for instance in polar regions) were disproportionately vulnerable to extinction, and animals that could only live in a narrow range of temperatures (especially ranges less than 15°C) were significantly more likely to become extinct.
  • However, geographic range size was the strongest predictor of extinction risk. Species with larger geographic ranges were significantly less likely to go extinct. Body size was also important, with smaller-bodied species more likely to become extinct.
  • All of the traits studied had a cumulative impact on extinction risk. For instance, species with both small geographic ranges and narrow thermal ranges were even more susceptible to extinction than species that had only one of these traits.


Cooper Malanoski (Department of Earth Sciences, University of Oxford), first author of the study, said: 'Our study revealed that geographic range was the strongest predictor of extinction risk for marine invertebrates, but that the magnitude of climate change is also an important predictor of extinction, which has implications for biodiversity today in the face of climate change.'

With current human-driven climate change already pushing many species up to and beyond the brink of extinction, these results could help identify the animals that are most at risk, and inform strategies to protect them.

Lead author Professor Erin Saupe (Department of Earth Sciences, University of Oxford) said: 'The evidence from the geological past suggests that global biodiversity faces a harrowing future, given projected climate change estimates. In particular, our model suggests that species with restricted thermal ranges of less than 15°C, living in the poles or tropics, are likely to be at the greatest risk of extinction. However, if the localized climate change is large enough, it could lead to significant extinction globally, potentially pushing us closer to a sixth mass extinction.'

According to the research team, future work should explore how climate change interacts with other potential drivers of extinction, such as ocean acidification and anoxia (where seawater becomes depleted of oxygen).

Read more at Science Daily

Nov 7, 2023

Fossils tell tale of last primate to inhabit North America before humans

The story of Ekgmowechashala, the final primate to inhabit North America before Homo sapiens or Clovis people, reads like a spaghetti western: A grizzled and mysterious loner, against the odds, ekes out an existence on the American Plains.

Except this tale unfolded about 30 million years ago, just after the Eocene-Oligocene transition during which North America saw great cooling and drying, making the continent less hospitable to warmth-loving primates.

Today, paleontologists from the University of Kansas and the Institute of Vertebrate Paleontology and Paleoanthropology in Beijing have published evidence in the Journal of Human Evolution shedding light on the long-standing saga of Ekgmowechashala, based on fossil teeth and jaws found in both Nebraska and China.

To do so, the researchers first had to reconstruct its family tree, a job helped by the discovery of an even more ancient Chinese "sister taxon" of Ekgmowechashala the team has named Palaeohodites (or "ancient wanderer"). The Chinese fossil discovery resolves the mystery of Ekgmowechashala's presence in North America, showing it was an immigrant rather than the product of local evolution.

"This project focuses on a very distinctive fossil primate known to paleontologists since the 1960s," said lead author Kathleen Rust, a doctoral candidate in paleontology at KU's Biodiversity Institute and Natural History Museum. "Due to its unique morphology and its representation only by dental remains, its place on the mammalian evolutionary tree has been a subject of contention and debate. There's been a prevailing consensus leaning towards its classification as a primate. But the timing and appearance of this primate in the North American fossil record are quite unusual. It appears suddenly in the fossil record of the Great Plains more than 4 million years after the extinction of all other North American primates, which occurred around 34 million years ago."

In the 1990s, Rust's doctoral adviser and co-author Chris Beard, KU Foundation Distinguished Professor and senior curator of vertebrate paleontology, collected fossils from the Nadu Formation in the Baise Basin in Guangxi, China, that closely resembled the Ekgmowechashala material known from North America. By that time, Ekgmowechashala was notoriously enigmatic among North American paleontologists.

"When we were working there, we had absolutely no idea that we would find an animal that was closely related to this bizarre primate from North America, but literally as soon as I picked up the jaw and saw it, I thought, 'Wow, this is it,'" Beard said. "It's not like it took a long time, and we had to undertake all kinds of detailed analysis -- we knew what it was. Here in KU's collection, we have some critical fossils, including what is still by far the best upper molar of Ekgmowechashala known from North America. That upper molar is so distinctive and looks quite similar to the one from China that we found that it kind of seals the deal."

Beard left it to Rust to conduct the morphological analysis that tied Ekgmowechashala and its cousin Palaeohodites from China in a phylogenetic tree to establish their evolutionary relationships.

In the course of the work, Rust was able to draw conclusions about how Ekgmowechashala came to be discovered in Nebraska, millions of years after its fellow primates died out in the continent's fossil record.

"We collected a substantial amount of morphological data to create an evolutionary tree using a phylogenetic reconstruction software and algorithm," Rust said. "This evolutionary tree suggests a close evolutionary relationship between North American Ekgmowechashala and Palaeohodites from China, which Chris and his colleagues discovered in the 1990s. The results from our analysis unequivocally supports this hypothesis."

The KU researchers said their discovery is not only exciting in terms of discovering a new primate species from late Eocene China -- but also in settling the origin story of Ekgmowechashala. Based on their investigation, Ekgmowechashala did not descend from an older North American primate that somehow survived the cooler and drier conditions that caused other North American primates to go extinct. Rather, its ancestors crossed over the Beringian region millions of years later, anticipating the route followed by the first Native Americans much later in time.

"Our analysis dispels the idea that Ekgmowechashala is a relic or survivor of earlier primates in North America," Rust said. "Instead, it was an immigrant species that evolved in Asia and migrated to North America during a surprisingly cool period, most likely via Beringia."

Species like Ekgmowechashala that show up suddenly in the fossil record long after their relatives have died off are referred to as "Lazarus taxa" after the biblical figure who was raised from the dead.

"The 'Lazarus effect' in paleontology is when we find evidence in the fossil record of animals apparently going extinct -- only to reappear after a long hiatus, seemingly out of nowhere," Beard said. "This is the grand pattern of evolution that we see in the fossil record of North American primates. The first primates came to North America about 56 million years ago at the beginning of the Eocene, and they flourished on this continent for more than 20 million years. But they went extinct when climate became cooler and drier near the Eocene-Oligocene boundary, about 34 million years ago. Several million years later Ekgmowechashala shows up like a drifting gunslinger in a Western movie, only to be a flash in the pan as far as the long trajectory of evolution is concerned. After Ekgmowechashala is gone for more than 25 million years, Clovis people come to North America, marking the third chapter of primates on this continent. Like Ekgmowechashala, humans in North America are a prime example of the Lazarus effect."

Rust and Beard were joined in the work by co-authors Xijun Ni of the Chinese Academy of Sciences, Beijing, and Kristen Tietjen, scientific illustrator with the KU Biodiversity Institute and Natural History Museum.

According to Rust, the tale of Ekgmowechashala is worth people's attention because it happened in an era of profound environmental and climatic changes, much like our own that's driven by human activity.

"It's crucial to comprehend how past biota reacted to such shifts," she said. "In such situations, organisms typically either adapt by retreating to more hospitable regions with available resources or face extinction. Around 34 million years ago, all of the primates in North America couldn't adapt and survive. North America lacked the necessary conditions for survival. This underscores the significance of accessible resources for our non-human primate relatives during times of drastic climatic change."

The study is also a part of a larger story that represents the earliest chapters of our own evolutionary journey that ultimately led to our own species, Rust said.

Read more at Science Daily

Aug 5, 2023

Oldest known species of swimming jellyfish identified

Royal Ontario Museum (ROM) announces the oldest swimming jellyfish in the fossil record with the newly named Burgessomedusa phasmiformis. These findings are announced in the journal Proceedings of the Royal Society B.

Jellyfish belong to medusozoans, or animals producing medusae, and include today's box jellies, hydroids, stalked jellyfish and true jellyfish. Medusozoans are part of one of the oldest groups of animals to have existed, called Cnidaria, a group which also includes corals and sea anemones. Burgessomedusa unambiguously shows that large, swimming jellyfish with a typical saucer or bell-shaped body had already evolved more than 500 million years ago.

Burgessomedusa fossils are exceptionally well preserved at the Burgess Shale considering jellyfish are roughly 95% composed of water. ROM holds close to two hundred specimens from which remarkable details of internal anatomy and tentacles can be observed, with some specimens reaching more than 20 centimetres in length. These details enable classifying Burgessomedusa as amedusozoan. By comparison with modern jellyfish, Burgessomedusa would also have been capable of free-swimming and the presence of tentacles would have enabled capturing sizeable prey.

"Although jellyfish and their relatives are thought to be one of the earliest animal groups to have evolved, they have been remarkably hard to pin down in the Cambrian fossil record. This discovery leaves no doubt they were swimming about at that time," said co-author Joe Moysiuk, a Ph.D. candidate in Ecology & Evolutionary Biology at the University of Toronto, who is based at ROM.

This study, identifying Burgessomedusa, is based on fossil specimens discovered at the Burgess Shale and mostly found in the late 1980s and 1990s under former ROM Curator of Invertebrate Palaeontology Desmond Collins. They show that the Cambrian food chain was far more complex than previously thought, and that predation was not limited to large swimming arthropods like Anomalocaris (see field image showing Burgessomedusa and Anomalocaris preserved on the same rock surface).

"Finding such incredibly delicate animals preserved in rock layers on top of these mountains is such a wonderous discovery. Burgessomedusa adds to the complexity of Cambrian foodwebs, and like Anomalocaris which lived in the same environment, these jellyfish were efficient swimming predators," said co-author, Dr. Jean-Bernard Caron, ROM's Richard Ivey Curator of Invertebrate Palaeontology. "This adds yet another remarkable lineage of animals that the Burgess Shale has preserved chronicling the evolution of life on Earth."

Cnidarians have complex life cycles with one or two body forms, a vase-shaped body, called a polyp, and in medusozoans, a bell or saucer-shaped body, called a medusa or jellyfish, which can be free-swimming or not. While fossilized polyps are known in ca. 560-million-year-old rocks, the origin of the free-swimming medusa or jellyfish is not well understood. Fossils of any type of jellyfish are extremely rare. As a consequence, their evolutionary history is based on microscopic fossilized larval stages and the results of molecular studies from living species (modelling of divergence times of DNA sequences). Though some fossils of comb-jellies have also been found at the Burgess Shale and in other Cambrian deposits, and may superficially resemble medusozoan jellyfish from the phylum Cnidaria, comb-jellies are actually from a quite separate phylum of animals called Ctenophora. Previous reports of Cambrian swimming jellyfish are reinterpreted as ctenophores.

Read more at Science Daily

Jul 7, 2023

Fossils reveal how ancient birds molted their feathers -- which could help explain why ancestors of modern birds survived when all the other dinosaurs died

Every bird you've ever seen -- every robin, every pigeon, every penguin at the zoo -- is a living dinosaur. Birds are the only group of dinosaurs that survived the asteroid-induced mass extinction 66 million years ago. But not all the birds alive at the time made it. Why the ancestors of modern birds lived while so many of their relatives died has been a mystery that paleontologists have been trying to solve for decades. Two new studies point to one possible factor: the differences between how modern birds and their ancient cousins molt their feathers.

Feathers are one of the key traits that all birds share. They're made of a protein called keratin, the same material as our fingernails and hair, and birds rely on them to fly, swim, camouflage, attract mates, stay warm, and protect against the sun's rays. But feathers are complex structures that can't be repaired, so as a means of keeping them in good shape, birds shed their feathers and grow replacements in a process called molting. Baby birds molt in order to lose their baby feathers and grow adult ones; mature birds continue to molt about once a year.

"Molt is something that I don't think a lot of people think about, but it is fundamentally such an important process to birds, because feathers are involved in so many different functions," says Jingmai O'Connor, associate curator of fossil reptiles at Chicago's Field Museum. "We want to know, how did this process evolve? How did it differ across groups of birds? And how has that shaped bird evolution, shaped the survivability of all these different clades?" Two of O'Connor's recent papers examine the molting process in prehistoric birds.

A paper in the journal Cretaceous Research published in May 2023 detailed the discovery of a cluster of feathers preserved in amber from a baby bird that lived 99 million years ago.

Today, baby birds are on a spectrum in terms of how developed they are when they're born and how much help they need from their parents. Altricial birds hatch naked and helpless; their lack of feathers means that their parents can more efficiently transmit body heat directly to the babies' skin. Precocial species, on the other hand, are born with feathers and are fairly self-sufficient.

All baby birds go through successive molts -- periods when they lose the feathers they have and grow in a new set of feathers, before eventually reaching their adult plumage. Molting takes a lot of energy, and losing a lot of feathers at once can make it hard for a bird to keep itself warm. As a result, precocial chicks tend to molt slowly, so that they keep a steady supply of feathers, while altricial chicks that can rely on their parents for food and warmth undergo a "simultaneous molt," losing all their feathers at roughly the same time.

The amber-preserved feathers in this study are the first definitive fossil evidence of juvenile molting, and they reveal a baby bird whose life history doesn't match any birds alive today. "This specimen shows a totally bizarre combination of precocial and altricial characteristics," says O'Connor, who was the first author of the paper alongside senior author Shundong Bi of the Indiana University of Pennsylvania. "All the body feathers are basically at the exact same stage in development, so this means that all the feathers started growing simultaneously, or near simultaneously." However, this bird was almost certainly part of a now-extinct group called the Enantiornithines, which O'Connor's previous work has shown were highly precocial.

O'Connor hypothesizes that the pressures of being a precocial baby bird that had to keep itself warm, while undergoing a rapid molt, might have been a factor in the ultimate doom of the Enantiornithines. "Enantiornithines were the most diverse group of birds in the Cretaceous, but they went extinct along with all the other non-avian dinosaurs," says O'Connor. "When the asteroid hit, global temperatures would have plummeted and resources would have become scarce, so not only would these birds have even higher energy demands to stay warm, but they didn't have the resources to meet them."

Meanwhile, an additional study published July 3 in Communications Biology by O'Connor and Field Museum postdoctoral researcher Yosef Kiat examines molting patterns in modern birds to better understand how the process first evolved.

In modern adult birds, molting usually happens once a year in a sequential process, in which they replace just a few of their feathers at a time over the course of a few weeks. That way, they're still able to fly throughout the molting process. Simultaneous molts in adult birds, in which all the flight feathers fall out at the same time and regrow within a couple weeks, are rarer and tend to show up in aquatic birds like ducks that don't absolutely need to fly in order to find food and avoid predators.

It's very rare to find evidence of molting in fossil birds and other feathered dinosaurs, and O'Connor and Kiat wanted to know why. "We had this hypothesis that birds with simultaneous molts, which occur in a shorter duration of time, will be less represented in the fossil record," says O'Connor -- less time spent molting means fewer opportunities to die during your molt and become a fossil showing signs of molting. To test their hypothesis, the researchers delved into the Field Museum's collection of modern birds.

"We tested more than 600 skins of modern birds stored in the ornithology collection of the Field Museum to look for evidence of active molting," says Kiat, the first author of the study. "Among the sequentially molting birds, we found dozens of specimens in an active molt, but among the simultaneous molters, we found hardly any."

While these are modern birds, not fossils, they provide a useful proxy. "In paleontology, we have to get creative, since we don't have complete data sets. Here, we used statistical analysis of a random sample to infer what the absence of something is actually telling us," says O'Connor. In this case, the absence of molting fossil birds, despite active molting being so prevalent in the sample of modern bird specimens, suggests that fossil birds simply weren't molting as often as most modern birds. They may have undergone a simultaneous molt, or they may not have molted on a yearly basis the way most birds today do.

Both the amber specimen and the study of molting in modern birds point to a common theme: prehistoric birds and feathered dinosaurs, especially ones from groups that didn't survive the mass extinction, molted differently from today's birds.

Read more at Science Daily

Jul 6, 2023

Discovery of 500-million-year-old fossil reveals astonishing secrets of tunicate origins

Karma Nanglu says his favorite animal is whichever one he's working on. But his latest subject may hold first place status for a while: a 500-million-year-old fossilfrom the wonderfully weird group of marine invertebrates, the tunicates.

"This animal is as exciting a discovery as some of the stuff I found when hanging off a cliffside of a mountain, or jumping out of a helicopter. It's just as cool," said Nanglu, postdoctoral researcher in the Department of Organismic and Evolutionary Biology at Harvard University.

In a new study in Nature Communications, Nanglu and coauthors describe the new fossil, named Megasiphon thylakos, revealing that ancestral tunicates lived as stationary, filter-feeding adults and likely underwent metamorphosis from a tadpole-like larva.

Tunicates are truly strange creatures that come in all shapes and sizes with a wide variety of lifestyles. An adult tunicate's basic shape is typically barrel-like with two siphons projecting from its body. One of the siphons draws in water with food particles through suction, allowing the animal to feed using an internal basket-like filter device. After the animal feeds, the other siphon expels the water.

There are two main tunicate lineages, ascidiaceans (often called "sea squirts") and appendicularias. Most ascidiaceans begin their lives looking like a tadpole and mobile, then metamorph into a barrel shaped adult with two siphons. They live their adult life attached to the seafloor. In contrast, appendicularians retain the look of a tadpole as they grow to adults and swim freely in the upper waters.

"This idea that they begin as tadpole-looking larva that, when ready to develop, basically headbutts a rock, sticks to it, and begins to metamorphosis by reabsorbing its own tail to transform into this being with two siphons is just awe-inspiring," sais Nanglu.

Interestingly, tunicates are the closest relatives of vertebrates, which includes fish, mammals, and even humans. How this odd-looking creature could be related to vertebrates is hard to imagine were it not for that tadpole beginning. Tunicate's close relationship to vertebrates makes studying them critical for understanding our own evolutionary origins. Unfortunately, it's not easy to do as tunicates are almost completely absent from the entire fossil record, with only a handful of fossils appearing convincingly as members of the group.

With so few fossils, scientists relied mainly on what could be learned from modern tunicate species. Because no one knew the morphology and ecology of the last common ancestor of the tunicates, scientists could only hypothesize that it was either a benthic animal with two siphons, like the ascidiaceans, or a free-swimming animal like the appendicularians.

M. thylakos had all the basic hallmarks of an ascidiacean tunicate, a barrel-shaped body and two prominent siphon-like growths. But the feature that stood out to the team was the dark bands running up and down the fossil's body.

High powered images of M. thylakos allowed the researchers to conduct a side-by-side comparison to a modern ascidiacean. The researchers used dissected sections of the modern tunicate Ciona to identify the nature of Megasiphon's dark bands. The comparisons revealed remarkable similarities between Ciona's muscles, which allow the tunicate to open and close its siphons, and the dark bands observed in the 500-million-year-old fossil.

"Megasiphon's morphology suggests to us that the ancestral lifestyle of tunicates involved a non-moving adult that filter fed with its large siphons," said Nanglu. "It's so rare to find not just a tunicate fossil, but one that provides a unique and unparalleled view into the early evolutionary origins of this enigmatic group."

M. thylakos is the only definitive tunicate fossil with soft tissue preservation that has been discovered to date. It is the oldest of its kind originating from the middle Cambrian Marjum Formation in Utah. The fossil was recognized as a tunicate by co-authors research associate, Rudy Lerosey-Aubril, and Professor Javier Ortega-Hernández (both in the Department of Organismic and Evolutionary Biology) while visiting the Utah Museum of Natural History (UMNH) in 2019.

"The fossil immediately caught our attention," said Ortega-Hernández, "although we mostly work on Cambrian arthropods, such as trilobites and their soft bodied relatives, the close morphological similarity of Megasiphon with modern tunicates was simply too striking to overlook, and we immediately knew that the fossil would have an interesting story to tell."

Fossils from the Marjum Formation date from shortly after the Cambrian Explosion, one of the most significant evolutionary events in Earth's history which occurred approximately 538 million years ago. During this time the most major animal groups appeared in the fossil record for the first time radically changing marine ecosystems. Tunicates, however, are noticeably absent in Cambrian rocks even though they are diverse and abundant in modern oceans.

There are many Cambrian fossil sites with exceptional preservation in the United States, but these are often overlooked compared to those from the Burgess Shale in Canada and Chengjiang in China. "The discovery of Megasiphon perfectly illustrates why Javier and I have been conducting fieldwork in Utah for the last ten years," said Lerosey-Aubril. "The Marjum strata has all of our attention right now as we know that it preserves fossils of animal groups, such as tunicates or comb jellies, that are almost entirely absent from the Cambrian fossil record."

Molecular clock estimates suggest that ascidiaceans originated 450 million years ago. However, at 500 million years old, M. thylakos provides the clearest view into the anatomy of ancient tunicates and their earliest evolutionary history. Significantly, M. thylakos provides evidence that most of the modern body plan of tunicates was already established soon after the Cambrian Explosion.

"Given the exceptional quality of preservation and the age of the fossil, we can actually say quite a bit about the evolutionary history of the tunicates," said Nanglu. "This is an incredible find as we had virtually no conclusive evidence for the ancestral modes of life for this group before this."

After collecting hundreds of new fossils again this spring, the researchers are convinced the Marjum Formation has only started to reveal its secrets.

Read more at Science Daily

Jun 30, 2023

New study sheds light on the evolution of animals

A study led by the University of Oxford has brought us one step closer to solving a mystery that has puzzled naturalists since Charles Darwin: when did animals first appear in the history of Earth? The results have been published today in the journal Trends in Ecology & Evolution.

Animals* first occur in the fossil record around 574 million years ago. Their arrival appears as a sudden 'explosion' in rocks from the Cambrian period (539 million years ago to 485 million years ago) and seems to counter the typically gradual pace of evolutionary change. Many scientists (including Darwin himself) believe that the first animals actually evolved long before the Cambrian period, but they cannot explain why they are missing from the fossil record.

The 'molecular clock' method, for instance, suggests that animals first evolved 800 million years ago, during the early part of the Neoproterozoic era (1,000 million years ago to 539 million years ago). This approach uses the rates at which genes accumulate mutations to determine the point in time when two or more living species last shared a common ancestor. But although rocks from the early Neoproterozoic contain fossil microorganisms, such as bacteria and protists, no animal fossils have been found.

This posed a dilemma for palaeontologists: does the molecular clock method overestimate the point at which animals first evolved? Or were animals present during the early Neoproterozoic, but too soft and fragile to be preserved?

To investigate this, a team of researchers led by Dr Ross Anderson from the University of Oxford's Department of Earth Sciences have carried out the most thorough assessment to date of the preservation conditions that would be expected to capture the earliest animal fossils.

Lead author Dr Ross Anderson said: 'The first animals presumably lacked mineral-based shells or skeletons, and would have required exceptional conditions to be fossilised. But certain Cambrian mudstone deposits demonstrate exceptional preservation, even of soft and fragile animal tissues. We reasoned that if these conditions, known as Burgess Shale-Type (BST) preservation, also occurred in Neoproterozoic rocks, then a lack of fossils would suggest a real absence of animals at that time.'

To investigate this, the research team used a range of analytical techniques on samples of Cambrian mudstone deposits from almost 20 sites, to compare those hosting BST fossils with those preserving only mineral-based remains (such as trilobites). These methods included energy dispersive X-ray spectroscopy and X-ray diffraction carried out at the University of Oxford's Departments of Earth Sciences and Materials, besides infrared spectroscopy carried out at Diamond Light Source, the UK's national synchrotron.

The analysis found that fossils with exceptional BST-type preservation were particularly enriched in an antibacterial clay called berthierine. Samples with a composition of at least 20% berthierine yielded BST fossils in around 90% of cases.

Microscale mineral mapping of BST fossils revealed that another antibacterial clay, called kaolinite, appeared to directly bind to decaying tissues at an early stage, forming a protective halo during fossilisation.

'The presence of these clays was the main predictor of whether rocks would harbour BST fossils' added Dr Anderson. 'This suggests that the clay particles act as an antibacterial barrier that prevents bacteria and other microorganisms from breaking down organic materials.'

The researchers then applied these techniques to analyse samples from numerous fossil-rich Neoproterozoic mudstone deposits. The analysis revealed that most did not have the compositions necessary for BST preservation. However, three deposits in Nunavut (Canada), Siberia (Russia), and Svalbard (Norway) had almost identical compositions to BST-rocks from the Cambrian period. Nevertheless, none of the samples from these three deposits contained animal fossils, even though conditions were likely favourable for their preservation.

Dr Anderson added: 'Similarities in the distribution of clays with fossils in these rare early Neoproterozoic samples and with exceptional Cambrian deposits suggest that, in both cases, clays were attached to decaying tissues, and that conditions conducive to BST preservation were available in both time periods. This provides the first "evidence for absence" and supports the view that animals had not evolved by the early Neoproterozoic era, contrary to some molecular clock estimates.'

According to the researchers, the study suggests a possible maximum age to the origin of animals of around 789 million years: the youngest estimated age of the Svalbard formation. The group now intend to search for progressively younger Neoproterozoic deposits with conditions for BST preservation. This will confirm the age of rocks in which animals are missing from the fossil record because they really were absent, rather than because conditions did not enable them to be fossilised. They also intend to perform laboratory experiments to investigate the mechanisms that underpin clay-organic interactions in BST preservation.

Dr Anderson added: 'Mapping the compositions of these rocks at the microscale is allowing us to understand the nature of the exceptional fossil record in a way that we have never been able to do before. Ultimately, this could help determine how the fossil record may be biased towards preserving certain species and tissues, altering our perception of biodiversity across different geological eras.'

Read more at Science Daily

Jun 19, 2023

Fossil study sheds light on famous spirals found in nature

Leaf arrangements in the earliest plants differ from most modern plants, overturning a long-held theory regarding the origins of a famous mathematical pattern found in nature, research shows.

The findings indicate that the arrangement of leaves into distinctive spirals, that are common in nature today, were not common in the most ancient land plants that first populated the earth's surface.

Instead, the ancient plants were found to have another type of spiral. This negates a long held theory about the evolution of plant leaf spirals, indicating that they evolved down two separate evolutionary paths.

Whether it is the vast swirl of a hurricane or the intricate spirals of the DNA double-helix, spirals are common in nature and most can be described by the famous mathematical series the Fibonacci sequence.

Named after the Italian mathematician, Leonardo Fibonacci, this sequence forms the basis of many of nature's most efficient and stunning patterns.

Spirals are common in plants, with Fibonacci spirals making up over 90% of the spirals. Sunflower heads, pinecones, pineapples and succulent houseplants all include these distinctive spirals in their flower petals, leaves or seeds.

Why Fibonacci spirals, also known as nature's secret code, are so common in plants has perplexed scientists for centuries, but their evolutionary origin has been largely overlooked.

Based on their widespread distribution it has long been assumed that Fibonacci spirals were an ancient feature that evolved in the earliest land plants and became highly conserved in plants.

However, an international team led by the University of Edinburgh has overthrown this theory with the discovery of non-Fibonacci spirals in a 407-million-year old plant fossil.

Using digital reconstruction techniques the researchers produced the first 3D models of leafy shoots in the fossil clubmoss Asteroxylon mackiei -- a member of the earliest group of leafy plants.

The exceptionally preserved fossil was found in the famous fossil site the Rhynie chert, a Scottish sedimentary deposit near the Aberdeenshire village of Rhynie.

The site contains evidence of some of the planet's earliest ecosystems -- when land plants first evolved and gradually started to cover the earth's rocky surface making it habitable.

The findings revealed that leaves and reproductive structures in Asteroxylon mackiei, were most commonly arranged in non-Fibonacci spirals that are rare in plants today.

This transforms scientists understanding of Fibonacci spirals in land plants. It indicates that non-Fibonacci spirals were common in ancient clubmosses and that the evolution of leaf spirals diverged into two separate paths.

The leaves of ancient clubmosses had an entirely distinct evolutionary history to the other major groups of plants today such as ferns, conifers and flowering plants.

The team created the 3D model of Asteroxylon mackiei, which has been extinct for over 400 million years, by working with digital artist Matt Humpage, using digital rendering and 3D printing.

The research, published in the journal Science, was funded by UK Research and Innovation (UKRI), The Royal Society and the German Research Foundation.

The study also involved researchers from, University College Cork, Ireland, University Münster, Germany and Northern Rogue Studios, UK.

Dr Sandy Hetherington, an evolutionary palaeobiologist and the project's lead at the University of Edinburgh, said:

"Our model of Asteroxylon mackiei lets us examine leaf arrangement in 3D for the first time. The technology to 3D print a 407-million-year old plant fossils and hold it in your hand is really incredible.

"Our findings give a new perspective on the evolution of Fibonacci spirals in plants."

Holly-Anne Turner, who worked on the project as an undergraduate student at the University of Edinburgh and is first author of the study, said:

"The clubmoss Asteroxylon mackiei is one of the earliest examples of a plant with leaves in the fossil record.

Read more at Science Daily

Apr 20, 2023

Fossils reveal the long-term relationship between feathered dinosaurs and feather-feeding beetles

New fossils in amber have revealed that beetles fed on the feathers of dinosaurs about 105 million years ago, showing a symbiotic relationship of one-sided or mutual benefit, according to an article published in Proceedings of the National Academy of Sciences today.

The main amber fragments studied, from the Spanish locality of San Just (Teruel), contain larval moults of small beetle larvae tightly surrounded by portions of downy feathers. The feathers belonged to an unknown theropod dinosaur, either avian (a term referring to "birds" in wide sense) or non-avian, as both types of theropods lived during the Early Cretaceous and shared often indistinguishable feather types. However, the studied feathers did not belong to modern birds since the group appeared about 30 million years later in the fossil record, during the Late Cretaceous.

When looking at modern ecosystems, we see how ticks infest cattle, frogs capture insects with acrobatic tongues, or some barnacles grow on the skin of whales. These are just a few of the diverse and complex ecological relationships between vertebrates and arthropods, which have coexisted for more than 500 million years. The way that these two groups have interacted throughout deep time is thought to have critically shaped their evolutionary history, leading to coevolution. Nevertheless, evidence of arthropod-vertebrate relationships is extremely rare in the fossil record.

The larval moults preserved in the amber were identified as related to modern skin beetles, or dermestids. Dermestid beetles are infamous pests of stored products or dried museum collections, feeding on organic materials that are hard for other organisms to decay such as natural fibres. However, dermestids also play a key role in the recycling of organic matter in the natural environment, commonly inhabiting nests of birds and mammals, where feathers, hair, or skin accumulate.

"In our samples, some of the feather portions and other remains -- including minute fossil faeces, or coprolites -- are in intimate contact with the moults attributed to dermestid beetles and show occasional damage and/or signs of decay. This is hard evidence that the fossil beetles almost certainly fed on the feathers and that these were detached from its host," explains Dr Enrique Peñalver, from the Geological and Mining Institute of Spain of the Spanish National Research Council (CN IGME-CSIC) and lead author of the study.

"The beetle larvae lived -- feeding, defecating, moulting -- in accumulated feathers on or close to a resin-producing tree, probably in a nest setting. A flow of resin serendipitously captured that association and preserved it for millions of years."

"Three additional amber pieces each containing an isolated beetle moult of a different maturity stage but assigned to the same species were also studied, allowing a better understanding of these minute insects than what is usually possible in palaeontology," says Dr David Peris, from the Botanical Institute of Barcelona (CSIC-Barcelona City Council) and co-author of the study. The most impressive, complete specimen was found in the amber deposit of Rábago/El Soplao in the northern Spain, roughly of the same age as San Just.

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Jan 29, 2023

New geosciences study shows Triassic fossils that reveal origins of living amphibians

The smallest of newly found fossils can upend what paleontologists know about our history.

A team of paleontologists from Virginia Tech and the U.S. Petrified Forest National Park, among others, have discovered the first "unmistakable" Triassic-era caecilian fossil -- the oldest-known caecilian fossils -- thus extending the record of this small, burrowing animal by roughly 35 million years. The find also fills a gap of at least 87 million years in the known historical fossil record of the amphibian-like creature.

The fossil was first co-discovered by Ben Kligman, a doctoral student in the Department of Geosciences, part of the Virginia Tech College of Science, at Arizona's Petrified Forest National Park during a dig in 2019. Named by Kligman as Funcusvermis gilmorei, the fossil extends the history of caecilians 35 million years back to Triassic Period, roughly 250 million to 200 million years ago.

Prior to this new study, published today in the journal Nature, only 10 fossil caecilian occurrences were known, dating back to the Early Jurassic Period, about 183 million years ago. However, previous DNA studies estimated evolutionary origins of caecilians back to the Carboniferous or Permian eras, some 370 million to 270 million years ago, according to Kligman, marking that 87-million-year gap. However, no such fossils had been found.

"The discovery of the oldest caecilian fossils highlights the crucial nature of new fossil evidence. Many of the biggest outstanding questions in paleontology and evolution cannot be resolved without fossils like this," said Kligman, who previously discovered a 220-million-year-old species of cynodont or stem-mammal, a precursor of modern-day mammals. "Fossil caecilians are extraordinarily rare, and they are found accidentally when paleontologists are searching for the fossils of other more common animals. Our discovery of one was totally unexpected, and it transformed the trajectory of my scientific interests."

The discovery of the fossils was made in 2019 by Kligman and Petrified Forest National Park student intern Xavier Jenkins, now a Ph.D. student at Idaho State University, while the duo was processing fossiliferous sediment from the park's nicknamed Thunderstorm Ridge via a microscope. Funcusvermis was found in a layer of the Chinle Formation dated to approximately 220 million years ago, when Arizona was positioned near the equator at the central part of the supercontinent Pangaea, Kligman said. This region at the time was subject to a hot, humid climate. Today, Arizona is still hot, but has low humidity.

"Seeing the first jaw under the microscope, with its distinctive double row of teeth, sent chills down my back," Kligman said. "We immediately knew it was a caecilian, the oldest caecilian fossil ever found, and a once-in-a-lifetime discovery."

Previous to this find, the 87-million-year gap in the fossil record hid the early evolutionary history of caecilians, leading to a decades-long debate amongst scientists over the relationships of caecilians to their amphibian relatives, frogs and salamanders.

"Funcusvermis extends the humid equatorial pattern of occurrence seen in all known fossil and living caecilians, suggesting that the biogeographic history of caecilians has been guided by restriction to these ecological settings, likely due to physiological constraints linked to humidity, and constrained by the drift of continental plates into and out of the humid-equatorial zone after the fragmentation of Pangaea," Kligman said.

Modern caecilians are limbless amphibians with cylindrical bodies with a compact, bullet-shaped skull that helps them burrow underground. Now exclusively home to South and Central America, Africa, and southern Asia, caecilians spend their lives burrowing in leaf-litter or soil searching for prey such as worms and insects. This underground existence has made studying caecilians difficult for scientists. Kligman, tongue in cheek, describes modern caecilians as an "eyeless sock puppet with the body of a worm."

Funcusvermis actually shares skeletal features related more with early frog and salamander fossils, strengthening evidence for a shared origin and close evolutionary relationship between caecilians and these two groups. Funcusvermis also shares skeletal features with an ancient group of amphibians known to paleontologists as dissorophoid temnospondyls. Kligman adds, "Unlike living caecilians, Funcusvermis lacks many adaptations associated with burrowing underground, indicating a slower acquisition of features associated with an underground lifestyle in the early stages of caecilian evolution."

Name that tune

Now, here's the fun part: The genus name 'Funcusvermis' was inspired by the Ohio Players' 1972 song "Funky Worm" from their album Pleasure, a favorite song of the authors that was often played while excavating fossils at Thunderstorm Ridge. 'Funcus' is derived from the Latinized form of the English word Funky for the upbeat, rhythmic form of dance music, while 'vermis' is derived from the Latin word for worm. (It's an excellent song, by the way. Instant earworm, so to speak.)

The species name, gilmorei, honors Ned Gilmore, the collections manager at the Academy of Natural Sciences of Philadelphia's Drexel University. (Kligman is from Philadelphia and volunteered with Gilmore's herpetology wet collection as an undergraduate student. "He was an important mentor who helped inspire my interest in fossils and amphibians," Kligman said.)

Co-authors on the study include Michelle Stocker, an assistant professor, and Sterling Nesbitt, an associate professor, in the Virginia Tech Department of Geosciences and members of the Global Change Center that is part of the Fralin Life Sciences Institute. Other authors include Adam Marsh, lead paleontologist; Matthew Smith, museum curator; and William Parker, chief of science and resource management, all at the Petrified Forest National Park; and Bryan Gee, postdoctoral fellow at the University of Washington's Burke Museum and Department of Biology.

"As the eponymous song says, it's the funkiest worm in the world," Marsh quipped.

Stocker added, "What we collect really determines what we can say about which animals that were present, how many of them there were, and what they looked like. Without using these methods for fossil collection and analysis we would be missing out on knowing so many important aspects of this Triassic ecosystem. Now that we have a search image of what bones to look for and how to look for them, it will be exciting to see what other fossil localities preserve these early lissamphibians."

Nesbitt said finds such as this can reset the game board on paleontology, in the best sense of the phrase. "This find clearly demonstrates that some fossils that you can barely see can greatly change our understanding of entire groups that you can see today," he said.

What's happened since 2019

At the Petrified Forest National Park, where the initial discovery was found in 2019, the lower jaws of at least 70 individuals of Funcusvermis have been recovered as of summer 2022, making the area "the most abundant fossil caecilian-producing bonebed ever discovered," Kligman said.

Only a handful of bones of Funcusvermis have been found, including upper and lower jaws, a vertebra, and part of a hind-limb, Kligman said. All of the found bones were disarticulated, not as complete skeletons. Without complete skeletons, Kligman and his fellow researchers cannot exactly determine the body length of Funcusvermis, but inferences from isolated elements, such as the lower jaw being less than a quarter of an inch long, indicate that Funcusvermis was a tiny animal.

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Jul 4, 2022

How placentas evolved in mammals

The fossil record tells us about ancient life through the preserved remains of body parts like bones, teeth and turtle shells. But how to study the history of soft tissues and organs, which can decay quickly, leaving little evidence behind?

In a new study, scientists use gene expression patterns, called transcriptomics, to investigate the ancient origins of one organ: the placenta, which is vital to pregnancy.

"In some mammals, like humans, the placenta is really invasive, so it invades all the way through the wall of the uterus, into the maternal tissue. In other mammals, the placenta just touches the wall of the uterus. And then there's everything in between," says senior author Vincent J. Lynch, PhD, associate professor of biological sciences in the University at Buffalo College of Arts and Sciences.

"So what kind of placentas were early placentas?" he says. "We use gene expression patterns to reconstruct the evolution of the placenta and predict what the placenta of the last common ancestor of eutherian mammals looked like. Our data tells us that this placenta was invasive, and that non-invasive placentas evolved multiple times among mammals. This addresses a 150-year-old mystery: People have been debating what kind of placenta the first one was since then."

As Lynch explains, all living mammals other than marsupials and egg-laying monotremes are eutherians, which have long pregnancies in which the developing fetus evokes a strong physiological response in the mother.

The research was published on June 30 in eLife. Lynch led the study with first author Katelyn Mika, PhD, University of Chicago postdoctoral scholar in human genetics and in organismal biology and anatomy. Camilla M. Whittington, PhD, and Bronwyn M. McAllan, PhD, both at the University of Sydney, are also co-authors.

"Our ability to ask how the placenta might have functioned at different points during its evolution by using the gene expression profiles of currently existing animals to reconstruct the ancestors is a really cool approach and provides us more information on how changing gene expression can contribute to the evolution of a new trait," Mika says.

To conduct the analysis, the team compared the genes active in the uterus of various mammals during pregnancy. After finding that these gene expression profiles correlated with the degree of placental invasiveness, the scientists used their data to predict what ancestral mammalian placentas looked like.

The study included about 20 species, such as the egg-laying platypus, pouch-bearing marsupials, and a range of eutherian mammals that give birth to live young.

The small subset is one limitation of the analysis: The authors write in eLife that research on a larger number of species is needed to help determine the strength of the findings.

Nevertheless, the study makes important contributions in understanding how pregnancy evolved, Lynch says. The results could also benefit modern medicine.

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Jun 14, 2022

Pioneering study shows climate played crucial role in changing location of ancient coral reefs

The study, published in Nature Communications, demonstrates how changes in temperature and plate tectonics, where the positions of Earth's continents were in very different positions than today, have determined the distribution of corals through the ages.

Although climate has often been regarded as the main driver of the location of coral reefs, this had yet to be proven due to limited fossil records. Now, for the first time, a team of international scientists used habitat modelling and reconstructions of past climates to predict the distribution of suitable environments for coral reefs over the last 250 million years.

The researchers, from the University of Vigo, in Spain, the University of Bristol and University College London in the UK, then checked their predictions using fossil evidence of warm-water coral reefs. They showed that corals in the past, from 250 to about 35 million years ago, existed much further from the equator than today, due to warmer climatic conditions, and a more even distribution of shallow ocean floor.

"Our work demonstrates that warm-water coral reefs track tropical-to-subtropical climatic conditions over geological timescales. In warmer intervals, coral reefs expanded poleward. However, in colder intervals, they became constrained to tropical and subtropical latitudes," said first author Dr Lewis Jones, a computational palaeobiologist research fellow at the University of Vigo.

Suitable coral habitats became restricted to the tropical regions from about 35 million years ago, driven by global cooling and increases in shallow oceans resulting from tectonic changes of the Indo-Australian Archipelago which is recognised as a marine biodiversity hotspot.

Although this suggests warm temperatures permitted long-term poleward expansions of corals in the past, the researchers say coral reef ecosystems are unlikely to match the rapid rate of human-induced climate change.

"Current anthropogenic climate change will result in the poleward expansion of suitable habitat for coral reefs. In fact, we are already witnessing the expansion of some tropical reef corals. However, whether coral reef ecosystems -- and all the biodiversity they support -- can keep pace with the current rapid rate of anthropogenic climate change is another question," Jones said.

"Limiting global warming is fundamental to saving coral reefs, as well as the biodiversity they house. Yet, perhaps even more important is reducing the rate of global warming."

Warm-water coral reefs, also known as 'rainforests of the sea', support the greatest biodiversity of marine organisms on Earth. In today's oceans, these biologically rich ecosystems, including reef fishes, are limited to the tropics and subtropics, where temperatures of the ocean surface typically do not fall below 18ºC. A substantial proportion of this modern biodiversity is found in the Indo-Australian Archipelago. However, in the geological past, coral reef ecosystems also existed outside of the tropics and subtropics, with their fossil remains found much further from the equator.

Co-author Dr Alex Farnsworth, Senior Research Associate in meteorology and climate modelling from the University of Bristol Cabot Institute for the Environment, said: "Climate has changed significantly throughout geological time, however understanding how it has impacted coral reef ecosystems has been difficult due to a lack of quantifiable data which has significant gaps.

"Using this new combined data-model approach we can start to better understand reef ecosystems evolution and behaviour."

Previous work has failed to find a strong relationship between temperature and the distribution of coral reefs because the fossil record is incomplete and biased. For example, not all the remains of organisms or ecosystems that existed in the past are recorded in the fossil record, and it has been shown the single most important factor explaining the sampled distribution of ancient reefs is Gross Domestic Product, with the majority of known fossil reef data stemming from wealthy countries, purely because these are the regions where we have looked hardest.

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May 19, 2022

First animals developed complex ecosystems before the Cambrian explosion

Early animals formed complex ecological communities more than 550 million years ago, setting the evolutionary stage for the Cambrian explosion, according to a study by Rebecca Eden, Emily Mitchell, and colleagues at the University of Cambridge, UK, publishing May 17 in the open-access journal PLOS Biology.

The first animals evolved towards the end of the Ediacaran period, around 580 million years ago. However, the fossil record shows that after an initial boom, diversity declined in the run-up to the dramatic burgeoning of biodiversity in the so-called "Cambrian explosion" nearly 40 million years later. Scientists have suggested this drop in diversity is evidence of a mass extinction event roughly 550 million years ago -- possibly caused by an environmental catastrophe -- but previous research has not investigated the structure of these ancient ecological communities.

To evaluate the evidence for an Ediacaran mass extinction, researchers analyzed the metacommunity structure of three fossil assemblages that span the last 32 million years of this geological period (between 575 to 543 million years ago). They used published paleoenvironmental data, such as ocean depth and rock characteristics, to look for metacommunity structure indicative of environmental specialization and interactions between species. The analysis revealed increasingly complex community structure in the later fossil assemblages, suggesting that species were becoming more specialized and engaging in more inter-species interactions towards the end of the Ediacaran era, a trend often seen during ecological succession.

The results point to competitive exclusion, rather than mass extinction, as the cause of the diversity drop in the late Ediacaran period, the authors say. The analysis indicates that the features of ecological and evolutionary dynamics commonly associated with the Cambrian explosion -- such as specialization and niche contraction -- were established by the first animal communities in the late Ediacaran.

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Oct 30, 2021

New species of human ancestor named: Homo bodoensis

An international team of researchers, led by University of Winnipeg palaeoanthropologist Dr. Mirjana Roksandic, has announced the naming of a new species of human ancestor, Homo bodoensis. This species lived in Africa during the Middle Pleistocene, around half a million years ago, and was the direct ancestor of modern humans.

The Middle Pleistocene (now renamed Chibanian and dated to 774,000-129,000 years ago) is important because it saw the rise of our own species (Homo sapiens) in Africa, our closest relatives, and the Neanderthals (Homo neanderthalensis) in Europe.

However, human evolution during this age is poorly understood, a problem which paleoanthropologists call "the muddle in the middle." The announcement of Homo bodoensis hopes to bring some clarity to this puzzling, but important chapter in human evolution.

The new name is based on a reassessment of existing fossils from Africa and Eurasia from this time period. Traditionally, these fossils have been variably assigned to either Homo heidelbergensis or Homo rhodesiensis, both of which carried multiple, often contradictory definitions.

"Talking about human evolution during this time period became impossible due to the lack of proper terminology that acknowledges human geographic variation" according to Roksandic, lead author on the study.

Recently, DNA evidence has shown that some fossils in Europe called H. heidelbergensis were actually early Neanderthals, making the name redundant. For the same reason, the name needs to be abandoned when describing fossil humans from east Asia according to co-author, Xiu-Jie Wu (Institute of Vertebrate Paleontology and Paleoanthropology, Beijing, China).

Further muddling the narrative, African fossils dated to this period have been called at times both H. heidelbergensis and H. rhodesiensis. H. rhodesiensis is poorly defined and the name has never been widely accepted. This is partly due to its association with Cecil Rhodes and the horrendous crimes carried out during colonial rule in Africa -- an unacceptable honour in light of the important work being done toward decolonizing science.

The name "bodoensis" derives from a skull found in Bodo D'ar, Ethiopia, and the new species is understood to be a direct human ancestor. Under the new classification, H. bodoensis will describe most Middle Pleistocene humans from Africa and some from Southeast Europe, while many from the latter continent will be reclassified as Neanderthals,

The co-first author Predrag Radovic (Faculty of Philosophy, University of Belgrade, Serbia) says, "Terms need to be clear in science, to facilitate communication. They should not be treated as absolute when they contradict the fossil record."

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Oct 4, 2021

Earliest evidence yet of huge hippos in Britain

Palaeobiologists have unearthed the earliest evidence yet of hippos in the UK.

Excavations at Westbury Cave in Somerset, led by University of Leicester PhD student Neil Adams, uncovered a million-year-old hippo tooth which shows the animal roamed Britain much earlier than previously thought.

In a new study published in the Journal of Quaternary Science and co-authored with researchers from Royal Holloway, University of London, the tooth is identified as belonging to an extinct species of hippo called Hippopotamus antiquus, which ranged across Europe in warm periods during the Ice Age.

It was much larger than the modern African hippo, weighing around 3 tonnes, and was even more reliant on aquatic habitats than its living relative.

Research demonstrates that the fossil is over one million years old, eclipsing the previous record of hippo in the UK by at least 300,000 years and filling an important gap in the British fossil record.

Neil Adams, PhD researcher in the Centre for Palaeobiology Research at the University of Leicester and Earth Collections Project Officer at the Oxford University Museum of Natural History, said:

"It was very exciting to come across a hippo tooth during our recent excavations at Westbury Cave. It is not only the first record of hippo from the site, but also the first known hippo fossil from any site in Britain older than 750,000 years.

"Erosion caused by the coming and going of ice sheets, as well as the gradual uplift of the land, has removed large parts of the deposits of this age in Britain. Our comparisons with sites across Europe show that Westbury Cave is an important exception and the new hippo dates to a previously unrecognised warm period in the British fossil record."

Scientists know remarkably little about the fauna, flora and environments in Britain between about 1.8 and 0.8 million years ago, a key period when early humans were beginning to occupy Europe.

But new research at Westbury Cave is helping to fill in this gap. It shows that during this interval there were periods warm and wet enough to allow hippos to migrate all the way from the Mediterranean to southern England.

Professor Danielle Schreve, Professor of Quaternary Science at Royal Holloway and co-author of the study, said:

"Hippos are not only fabulous animals to find but they also reveal evidence about past climates. Many megafaunal species (those over a tonne in weight) are quite broadly tolerant of temperature fluctuations but in contrast, we know modern hippos cannot cope with seasonally frozen water bodies.

"Our research has demonstrated that in the fossil record, hippos are only found in Britain during periods of climatic warmth, when summer temperatures were a little warmer than today but most importantly, winter temperatures were above freezing."

By examining the European fossil record, the research team show that the Westbury Cave hippo was likely to have lived during a particularly warm period around 1.1 to 1.0 million years ago.

Hippo remains of this age are known from Germany, France and the Netherlands and the new fossil from Somerset represents a previously unknown part of this colonisation of northwest Europe.

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Sep 9, 2021

500-million-year-old fossil represents rare discovery of ancient animal in North America

Many scientists consider the "Cambrian explosion" -- which occurred about 530-540 million years ago -- as the first major appearance of many of the world's animal groups in the fossil record. Like adding pieces to a giant jigsaw puzzle, each discovery dating from this time period has added another piece to the evolutionary map of modern animals. Now, researchers at the University of Missouri have found a rare, 500-million-year-old "worm-like" fossil called a palaeoscolecid, which is an uncommon fossil group in North America. The researchers believe this find, from an area in western Utah, can help scientists better understand how diverse the Earth's animals were during the Cambrian explosion.

Jim Schiffbauer, an associate professor of geological sciences in the MU College of Arts and Science and one of the study's co-authors, said that while this fossil has the same anatomical organization as modern worms, it doesn't exactly match with anything we see on modern Earth.

"This group of animals are extinct, so we don't see them, or any modern relatives, on the planet today," Schiffbauer said. "We tend to call them 'worm-like' because it's hard to say that they perfectly fit with annelids, priapulids, or any other types of organism on the planet today that we would generally call a "worm." But palaeoscolecids have the same general body plan, which in the history of life has been an incredibly successful body plan. So, this is a pretty cool addition because it expands the number of worm-like things that we know about from 500 million years ago in North America and adds to our global occurrences and diversity of the palaeoscolecids."

At the time, this palaeoscolecid was likely living on an ocean floor, said Wade Leibach, an MU graduate teaching assistant in the College of Arts and Science, and lead author on the study.

"It is the first known palaeoscolecid discovery in a certain rock formation -- the Marjum Formation of western Utah -- and that's important because this represents one of only a few palaeoscolecid taxa in North America," Leibach said. "Other examples of this type of fossil have been previously found in much higher abundance on other continents, such as Asia, so we believe this find can help us better understand how we view prehistoric environments and ecologies, such as why different types of organisms are underrepresented or overrepresented in the fossil record. So, this discovery can be viewed from not only the perspective of its significance in North American paleontology, but also broader trends in evolution, paleogeography and paleoecology."

Leibach, who switched his major from biology to geology after volunteering to work with the invertebrate paleontology collections at the University of Kansas, began this project as an undergraduate student by analyzing a box of about a dozen fossils in the collections of the KU Biodiversity Institute. Initially, Leibach and one of his co-authors, Anna Whitaker, who was a graduate student at KU at the time and now is at the University of Toronto-Mississauga, analyzed each fossil using a light microscope, which identified at least one of the fossils to be a palaeoscolecid.

Leibach worked with Julien Kimmig, who was at the KU Biodiversity Institute at the time and is now at Penn State University, to determine that, in order to be able to confirm their initial findings, he would need the help of additional analyses provided by sophisticated microscopy equipment located at the MU X-ray Microanalysis Core, which is directed by Schiffbauer. Using the core facility at MU, Leibach focused his analysis on the indentations left in the fossil by the ancient animal's microscopic plates, which are characteristic of the palaeoscolecids.

"These very small mineralized plates are usually nanometers-to-micrometers in size, so we needed the assistance of the equipment in Dr. Schiffbauer's lab to be able to study them in detail because their size, orientation and distribution is how we classify the organism to the genus and species levels," Leibach said.

Leibach said the team found a couple reasons about why this particular fossil may be found in limited quantities in North America as compared to other parts of the world. They are:
 

  • Geochemical limitations or different environments that may be more predisposed to preserving these types of organisms.
  • Ecological competition, which may have driven this type of organism to be less competitive or less abundant in certain areas.


The new taxon is named Arrakiscolex aasei after the fictional planet Arrakis in the novel "Dune" by Frank Herbert, which is inhabited by a species of armored worm and the collector of the specimens Arvid Aase.

Read more at Science Daily

Mar 25, 2021

Older than expected: Teeth reveal the origin of the tiger shark

With a total length of up to 5.5m, the tiger shark is one of the largest predatory sharks known today. This shark is a cosmopolitan species occurring in all oceans worldwide. It is characterized by a striped pattern on its back, which is well marked in juveniles but usually fades in adults.

An international team of researchers led by Julia Türtscher from the University of Vienna examined the fossil record of these apex predators and found out that modern tiger sharks are older than previously thought and that several tiger shark species existed in past compared to the single species living today. The results of this study are published in the journal Paleobiology.

The fossil history of modern sharks reaches back to the Permian, about 295 million years ago. Complete fossil shark skeletons are very rare -- the skeleton, which consists almost entirely of cartilage, is only preserved under very special circumstances during the fossilization processes. Due to the lifelong continuous tooth replacement, most extinct sharks are therefore only known by their well-mineralized teeth, which, nonetheless, can provide deep insights into their evolutionary history.

The teeth of the modern tiger shark are unique: they have a broad, double-serrated cutting edge which even allows them to cut through sea turtle shells with ease. Tiger shark teeth are known in the fossil record since about 56 million years. Based on these fossil teeth, over 22 extinct tiger shark species have been described.

An international team of researchers led by Julia Türtscher from the University of Vienna has now examined the fossil history of the tiger shark and its extinct relatives. With the help of geometric morphometrics, the scientists were able to show that only 5 of the 22 known fossil tiger sharks actually represent valid species. Nevertheless, tiger sharks were more diverse in the past and only a single species survived until today.

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Aug 30, 2020

Using math to examine the sex differences in dinosaurs

 Male lions typically have manes. Male peacocks have six-foot-long tail feathers. Female eagles and hawks can be about 30% bigger than males. But if you only had these animals' fossils to go off of, it would be hard to confidently say that those differences were because of the animals' sex. That's the problem that paleontologists face: it's hard to tell if dinosaurs with different features were separate species, different ages, males and females of the same species, or just varied in a way that had nothing to do with sex. A lot of the work trying to show differences between male and female dinosaurs has come back inconclusive. But in a new paper, scientists show how using a different kind of statistical analysis can often estimate the degree of sexual variation in a dataset of fossils.

"It's a whole new way of looking at fossils and judging the likelihood that the traits we see correlate with sex," says Evan Saitta, a research associate at Chicago's Field Museum and the lead author of the new paper in the Biological Journal of the Linnean Society. "This paper is part of a larger revolution of sorts about how to use statistics in science, but applied in the context of paleontology."

Unless you find a dinosaur skeleton that contains the fossilized eggs that it was about to lay, or a similar dead giveaway, it's hard to be sure about an individual dinosaur's sex. But many birds, the only living dinosaurs, vary a lot between males and females on average, a phenomenon called sexual dimorphism. Dinosaurs' cousins, the crocodilians, show sexual dimorphism too. So it stands to reason that in many species of dinosaurs, males and females would differ from each other in a variety of traits.

But not all differences in animals of the same species are linked to their sex. For example, in humans, average height is related to sex, but other traits like eye color and hair color don't neatly map onto men versus women. We often don't know precisely how the traits we see in dinosaurs relate to their sex, either. Since we don't know if, say, larger dinosaurs were female, or dinosaurs with bigger crests on their heads were male, Saitta and his colleagues looked for patterns in the differences between individuals of the same species. To do that, they examined measurements from a bunch of fossils and modern species and did a lot of math.

Other paleontologists have tried to look for sexual dimorphism in dinosaurs using a form of statistics (called significance testing, for all you stats nerds) where you collect all your data points and then calculate the probability that those results could have happened by pure chance rather than an actual cause (like how doctors determine whether a new medicine is more helpful than a placebo). This kind of analysis sometimes works for big, clean datasets. But, says Saitta, "with a lot of these dinosaur tests, our data is pretty bad" -- there aren't that many fossil specimens, or they're incomplete or poorly preserved. Using significance testing in these cases, Saitta argues, results in a lot of false negatives: since the samples are small, it takes an extreme amount of variation between the sexes to trigger a positive test result. (Significance testing isn't just a consideration for paleontologists -- concerns over a "replication crisis" have plagued researchers in psychology and medicine, where certain studies are difficult to reproduce.)

Instead, Saitta and his colleagues experimented with another form of stats, called effect size statistics. Effect size statistics is better for smaller datasets because it attempts to estimate the degree of sex differences and calculate the uncertainty in that estimate. This alternative statistical method takes natural variations into account without viewing dimorphism as black-or-white-many sexual dimorphisms can be subtle. Co-author Max Stockdale of the University of Bristol wrote the code to run the statistical simulations. Saitta and his colleagues uploaded measurements of dinosaur fossils to the program, and it yielded estimates of body mass dimorphism and error bars in those estimates that would have simply been dismissed using significance testing.

"We showed that if you adopt this paradigm shift in statistics, where you attempt to estimate the magnitude of an effect and then put error bars around that, you can often produce a fairly accurate estimate of sexual variation even when the sexes of the individuals are unknown," says Saitta.

For instance, Saitta and his colleagues found that in the dinosaur Maiasaura, adult specimens vary a lot in size, and the analyses show that these are likelier to correspond to sexual variation than differences seen in other dinosaur species. But while the current data suggest that one sex was about 45% bigger than the other, they can't tell if the bigger ones are males or females.

While there's a lot of work yet to be done, Saitta says he's excited that the statistical simulations gave such consistent results despite the limits of the fossil data.

"Sexual selection is such an important driver of evolution, and to limit ourselves to ineffective statistical approaches hurts our ability to understand the paleobiology of these animals," he says. "We need to account for sexual variation in the fossil record."

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Jun 28, 2019

A new normal: Study explains universal pattern in fossil record

Throughout life's history on earth, biological diversity has gone through ebbs and flows -- periods of rapid evolution and of dramatic extinctions. We know this, at least in part, through the fossil record of marine invertebrates left behind since the Cambrian period. Remarkably, extreme events of diversification and extinction happen more frequently than a typical, Gaussian, distribution would predict. Instead of the typical bell-shaped curve, the fossil record shows a fat-tailed distribution, with extreme, outlier, events occurring with higher-than-expected probability.

While scientists have long known about this unusual pattern in the fossil record, they have struggled to explain it. Many random processes that occur over a long time with large sample sizes, from processes that produce school grades to height among a population, converge on the common Gaussian distribution. "It's a very reasonable default expectation," says Santa Fe Institute Omidyar Fellow Andy Rominger. So why doesn't the fossil record display this common pattern?

In a new paper published in Science Advances, Rominger and colleagues Miguel Fuentes (San Sebastián University, Chile) and Pablo Marquet (Pontifical Catholic University of Chile) have taken a new approach to tackling this question. Instead of trying to only describe fluctuations in biodiversity across all types of organisms, they also look at fluctuations within clades, or groups of organisms that share a common ancestral lineage.

"Within a lineage of closely related organisms, there should be a conserved evolutionary dynamic. Between different lineages, that dynamic can change," says Rominger. That is, within clades, related organisms tend to find an effective adaptive strategy and never stray too far. But between these clade-specific fitness peaks are valleys of metaphorically uninhabited space. "It turns out, just invoking that simple idea, with some very simple mathematics, described the patterns in the fossil record very well."

These simple mathematics are tools that Fuentes, in 2009, used to describe another system with an unusual fat-tailed distribution: the stock market. By using superstatistics -- an approach from thermodynamics to describe turbulent flow -- Fuentes could accurately describe the hard-to-predict dramatic crashes and explosions in value.

"In biology, we see these crashes and explosions too, in terms of biodiversity," says Rominger. "We wondered if Fuentes' elegant approach could also describe the evolutionary dynamics we see in the fossil record."

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Mar 1, 2019

New findings shed light on origin of upright walking in human ancestors

This is a fossil hominin talus from site GWM67 (2005) at the time of its discovery.
The oldest distinguishing feature between humans and our ape cousins is our ability to walk on two legs -- a trait known as bipedalism. Among mammals, only humans and our ancestors perform this atypical balancing act. New research led by a Case Western Reserve University School of Medicine professor of anatomy provides evidence for greater reliance on terrestrial bipedalism by a human ancestor than previously suggested in the ancient fossil record.

Scott W. Simpson, PhD, led an analysis of a 4.5 million-year-old fragmentary female skeleton of the human ancestor Ardipithecus ramidus that was discovered in the Gona Project study area in the Afar Regional State of Ethiopia.

The newly analyzed fossils document a greater, but far from perfect, adaptation to bipedalism in the Ar. ramidus ankle and hallux (big toe) than previously recognized. "Our research shows that while Ardipithecus was a lousy biped, she was somewhat better than we thought before," said Simpson.

Fossils of this age are rare and represent a poorly known period of human evolution. By documenting more fully the function of the hip, ankle, and foot in Ardipithecus locomotion, Simpson's analysis helps illuminate current understanding of the timing, context, and anatomical details of ancient upright walking.

Previous studies of other Ardipithecus fossils showed that it was capable of terrestrial bipedalism as well as being able to clamber in trees, but lacked the anatomical specializations seen in the Gona fossil examined by Simpson. The new analysis, published in the Journal of Human Evolution, thus points to a diversity of adaptations during the transition to how modern humans walk today. "The fact that Ardipithecus could both walk upright, albeit imperfectly, and scurry in trees marks it out as a pivotal transitional figure in our human lineage," said Simpson.

Key to the adaptation of bipedality are changes in the lower limbs. For example, unlike monkeys and apes, the human big toe is parallel with the other toes, allowing the foot to function as a propulsive lever when walking. While Ardipithecus had an offset grasping big toe useful for climbing in trees, Simpson's analysis shows that it also used its big toe to help propel it forward, demonstrating a mixed, transitional adaptation to terrestrial bipedalism.

Specifically, Simpson looked at the area of the joints between the arch of the foot and the big toe, enabling him to reconstruct the range of motion of the foot. While joint cartilage no longer remains for the Ardipithecus fossil, the surface of the bone has a characteristic texture which shows that it had once been covered by cartilage. "This evidence for cartilage shows that the big toe was used in a more human-like manner to push off," said Simpson. "It is a foot in transition, one that shows primitive, tree-climbing physical characteristics but one that also features a more human-like use of the foot for upright walking." Additionally, when chimpanzees stand, their knees are "outside" the ankle, i.e., they are bow-legged. When humans stand, the knees are directly above the ankle -- which Simpson found was also true for the Ardipithecus fossil.

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Dec 7, 2018

Biggest mass extinction caused by global warming leaving ocean animals gasping for breath

This roughly 1.5-foot slab of rock from southern China shows the Permian-Triassic boundary. The bottom section is pre-extinction limestone. The upper section is microbial limestone deposited after the extinction.
The largest extinction in Earth's history marked the end of the Permian period, some 252 million years ago. Long before dinosaurs, our planet was populated with plants and animals that were mostly obliterated after a series of massive volcanic eruptions in Siberia.

Fossils in ancient seafloor rocks display a thriving and diverse marine ecosystem, then a swath of corpses. Some 96 percent of marine species were wiped out during the "Great Dying," followed by millions of years when life had to multiply and diversify once more.

What has been debated until now is exactly what made the oceans inhospitable to life -- the high acidity of the water, metal and sulfide poisoning, a complete lack of oxygen, or simply higher temperatures.

New research from the University of Washington and Stanford University combines models of ocean conditions and animal metabolism with published lab data and paleoceanographic records to show that the Permian mass extinction in the oceans was caused by global warming that left animals unable to breathe. As temperatures rose and the metabolism of marine animals sped up, the warmer waters could not hold enough oxygen for them to survive.

The study is published in the Dec. 7 issue of Science.

"This is the first time that we have made a mechanistic prediction about what caused the extinction that can be directly tested with the fossil record, which then allows us to make predictions about the causes of extinction in the future," said first author Justin Penn, a UW doctoral student in oceanography.

Researchers ran a climate model with Earth's configuration during the Permian, when the land masses were combined in the supercontinent of Pangaea. Before ongoing volcanic eruptions in Siberia created a greenhouse-gas planet, oceans had temperatures and oxygen levels similar to today's. The researchers then raised greenhouse gases in the model to the level required to make tropical ocean temperatures at the surface some 10 degrees Celsius (20 degrees Fahrenheit) higher, matching conditions at that time.

The model reproduces the resulting dramatic changes in the oceans. Oceans lost about 80 percent of their oxygen. About half the oceans' seafloor, mostly at deeper depths, became completely oxygen-free.

To analyze the effects on marine species, the researchers considered the varying oxygen and temperature sensitivities of 61 modern marine species -- including crustaceans, fish, shellfish, corals and sharks -- using published lab measurements. The tolerance of modern animals to high temperature and low oxygen is expected to be similar to Permian animals because they had evolved under similar environmental conditions. The researchers then combined the species' traits with the paleoclimate simulations to predict the geography of the extinction.

"Very few marine organisms stayed in the same habitats they were living in -- it was either flee or perish," said second author Curtis Deutsch, a UW associate professor of oceanography.

The model shows the hardest hit were organisms most sensitive to oxygen found far from the tropics. Many species that lived in the tropics also went extinct in the model, but it predicts that high-latitude species, especially those with high oxygen demands, were nearly completely wiped out.

To test this prediction, co-authors Jonathan Payne and Erik Sperling at Stanford analyzed late-Permian fossil distributions from the Paleoceanography Database, a virtual archive of published fossil collections. The fossil record shows where species were before the extinction, and which were wiped out completely or restricted to a fraction of their former habitat.

The fossil record confirms that species far from the equator suffered most during the event.

"The signature of that kill mechanism, climate warming and oxygen loss, is this geographic pattern that's predicted by the model and then discovered in the fossils," Penn said. "The agreement between the two indicates this mechanism of climate warming and oxygen loss was a primary cause of the extinction."

The study builds on previous work led by Deutsch showing that as oceans warm, marine animals' metabolism speeds up, meaning they require more oxygen, while warmer water holds less. That earlier study shows how warmer oceans push animals away from the tropics.

The new study combines the changing ocean conditions with various animals' metabolic needs at different temperatures. Results show that the most severe effects of oxygen deprivation are for species living near the poles.

"Since tropical organisms' metabolisms were already adapted to fairly warm, lower-oxygen conditions, they could move away from the tropics and find the same conditions somewhere else," Deutsch said. "But if an organism was adapted for a cold, oxygen-rich environment, then those conditions ceased to exist in the shallow oceans."

The so-called "dead zones" that are completely devoid of oxygen were mostly below depths where species were living, and played a smaller role in the survival rates. "At the end of the day, it turned out that the size of the dead zones really doesn't seem to be the key thing for the extinction," Deutsch said. "We often think about anoxia, the complete lack of oxygen, as the condition you need to get widespread uninhabitability. But when you look at the tolerance for low oxygen, most organisms can be excluded from seawater at oxygen levels that aren't anywhere close to anoxic."

Warming leading to insufficient oxygen explains more than half of the marine diversity losses. The authors say that other changes, such as acidification or shifts in the productivity of photosynthetic organisms, likely acted as additional causes.

The situation in the late Permian -- increasing greenhouse gases in the atmosphere that create warmer temperatures on Earth -- is similar to today.

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